chore: refine protobuf linking logic for Windows builds

- Enhanced CMake configuration to conditionally apply /WHOLEARCHIVE linking for protobuf targets, ensuring only library targets are included.
- Updated linking logic across multiple components including `yaze`, `yaze_emu`, `z3ed`, and test suites to improve compatibility and prevent linker errors.

Benefits:
- Increases build stability and clarity by ensuring only relevant targets are linked, reducing potential conflicts during the build process.

cmake/dependencies.cmake

@@ -95,7 +95,16 @@ else()
   endif()
 endif()
 
-set(YAZE_PROTOBUF_WHOLEARCHIVE_TARGETS ${YAZE_PROTOBUF_TARGETS})
+# Filter WHOLEARCHIVE targets to only include libraries (not executables like protoc)
+set(YAZE_PROTOBUF_WHOLEARCHIVE_TARGETS)
+foreach(_proto_target IN LISTS YAZE_PROTOBUF_TARGETS)
+  if(TARGET ${_proto_target})
+    get_target_property(_target_type ${_proto_target} TYPE)
+    if(_target_type MATCHES ".*_LIBRARY")
+      list(APPEND YAZE_PROTOBUF_WHOLEARCHIVE_TARGETS ${_proto_target})
+    endif()
+  endif()
+endforeach()
 
 if(YAZE_PROTOBUF_TARGETS)
   list(GET YAZE_PROTOBUF_TARGETS 0 YAZE_PROTOBUF_TARGET)