feat: Implement advanced routing system for agent tool responses

- Introduced AdvancedRouter class for routing hex analysis, map editing, and palette analysis responses.
- Added methods for generating GUI automation scripts and synthesizing multi-tool responses.
- Implemented knowledge modules for agent pretraining, covering ROM structure, hex analysis patterns, and tool usage examples.
- Enhanced data handling with structured responses, including summaries, detailed data, and next steps for user guidance.
- Refactored project build process to utilize std::filesystem for cross-platform patch application.

src/cli/handlers/project.cc

@@ -2,6 +2,7 @@
 #include "cli/z3ed.h"
 #include "util/file_util.h"
 #include "util/bps.h"
+#include <filesystem>
 #ifndef _WIN32
 #include <glob.h>
 #endif
@@ -40,17 +41,21 @@ absl::Status ProjectBuild::Run(const std::vector<std::string>& arg_vec) {
     return status;
   }
 
-#ifdef _WIN32
-  return absl::UnimplementedError(
-      "Project build with patches is not implemented on Windows yet.");
-#else
-
-  // Apply BPS patches
-  glob_t glob_result;
-  std::string pattern = project.patches_folder + "/*.bps";
-  glob(pattern.c_str(), GLOB_TILDE, NULL, &glob_result);
-  for (unsigned int i = 0; i < glob_result.gl_pathc; ++i) {
-    std::string patch_file = glob_result.gl_pathv[i];
+  // Apply BPS patches - cross-platform with std::filesystem
+  namespace fs = std::filesystem;
+  std::vector<std::string> bps_files;
+  
+  try {
+    for (const auto& entry : fs::directory_iterator(project.patches_folder)) {
+      if (entry.path().extension() == ".bps") {
+        bps_files.push_back(entry.path().string());
+      }
+    }
+  } catch (const fs::filesystem_error& e) {
+    // Patches folder doesn't exist or not accessible
+  }
+  
+  for (const auto& patch_file : bps_files) {
     std::vector<uint8_t> patch_data;
     auto patch_contents = util::LoadFile(patch_file);
     std::copy(patch_contents.begin(), patch_contents.end(),
@@ -60,13 +65,21 @@ absl::Status ProjectBuild::Run(const std::vector<std::string>& arg_vec) {
     rom.LoadFromData(patched_rom);
   }
 
-  // Run asar on assembly files
-  glob_t glob_result_asm;
-  std::string pattern_asm = project.patches_folder + "/*.asm";
-  glob(pattern_asm.c_str(), GLOB_TILDE, NULL, &glob_result_asm);
-  for (unsigned int i = 0; i < glob_result_asm.gl_pathc; ++i) {
+  // Run asar on assembly files - cross-platform
+  std::vector<std::string> asm_files;
+  try {
+    for (const auto& entry : fs::directory_iterator(project.patches_folder)) {
+      if (entry.path().extension() == ".asm") {
+        asm_files.push_back(entry.path().string());
+      }
+    }
+  } catch (const fs::filesystem_error& e) {
+    // No asm files
+  }
+  
+  for (const auto& asm_file : asm_files) {
     AsarPatch asar_patch;
-    auto status = asar_patch.Run({glob_result_asm.gl_pathv[i]});
+    auto status = asar_patch.Run({asm_file});
     if (!status.ok()) {
       return status;
     }
@@ -82,7 +95,6 @@ absl::Status ProjectBuild::Run(const std::vector<std::string>& arg_vec) {
   std::cout << "   Output ROM: " << output_file << std::endl;
 
   return absl::OkStatus();
-#endif
 }
 
 }  // namespace cli