chore: update configuration files and enhance dependency management

- Added new entries to `.pre-commit-config.yaml`, `cmake-format.yaml`, and `.github/dependabot.yml` to improve code quality checks and dependency updates.
- Enhanced GitHub Actions workflows by adding new steps for testing and build retention.
- Introduced support for the nlohmann_json library in CMake, allowing for conditional inclusion based on the `YAZE_ENABLE_JSON` option.
- Updated CMake configurations to streamline SDL2 and gRPC integration, ensuring proper linking and target management.

Benefits:
- Improves code quality and consistency through automated checks and formatting.
- Enhances dependency management and build reliability across platforms.
- Provides flexibility for users to enable optional features, improving overall functionality.

src/app/app.cmake

@@ -50,10 +50,9 @@ if(APPLE)
       ${CMAKE_SOURCE_DIR}/src/lib
       ${CMAKE_SOURCE_DIR}/src/lib/imgui
       ${CMAKE_SOURCE_DIR}/incl
-      ${SDL2_INCLUDE_DIR}
       ${PROJECT_BINARY_DIR}
     )
-    target_link_libraries(yaze_app_objcxx PUBLIC ${ABSL_TARGETS} yaze_util)
+    target_link_libraries(yaze_app_objcxx PUBLIC ${ABSL_TARGETS} yaze_util ${YAZE_SDL2_TARGETS})
     target_compile_definitions(yaze_app_objcxx PUBLIC MACOS)
 
     find_library(COCOA_LIBRARY Cocoa)
@@ -91,7 +90,7 @@ target_link_libraries(yaze_app_core_lib PUBLIC
   yaze_common
   ImGui
   ${ABSL_TARGETS}
-  ${SDL_TARGETS}
+  ${YAZE_SDL2_TARGETS}
   ${CMAKE_DL_LIBS}
 )
 

src/app/editor/editor_library.cmake

@@ -57,7 +57,7 @@ set(
   app/editor/ui/workspace_manager.cc
 )
 
-if(YAZE_WITH_GRPC)
+if(YAZE_ENABLE_GRPC)
   list(APPEND YAZE_APP_EDITOR_SRC
     app/editor/agent/agent_editor.cc
     app/editor/agent/agent_chat_widget.cc

src/app/editor/system/editor_card_registry.cc

@@ -7,6 +7,7 @@
 #include "app/gui/core/icons.h"
 #include "app/gui/core/theme_manager.h"
 #include "imgui/imgui.h"
+#include "util/log.h"
 
 namespace yaze {
 namespace editor {

src/app/emu/emu_library.cmake

@@ -31,7 +31,7 @@ target_link_libraries(yaze_emulator PUBLIC
   yaze_common
   yaze_app_core_lib
   ${ABSL_TARGETS}
-  ${SDL_TARGETS}
+  ${YAZE_SDL2_TARGETS}
 )
 
 set_target_properties(yaze_emulator PROPERTIES

src/app/gfx/gfx_library.cmake

@@ -21,13 +21,11 @@ macro(configure_gfx_library name)
     ${CMAKE_SOURCE_DIR}/src
     ${CMAKE_SOURCE_DIR}/src/lib
     ${CMAKE_SOURCE_DIR}/incl
-    ${SDL2_INCLUDE_DIR}
     ${PROJECT_BINARY_DIR}
   )
   target_link_libraries(${name} PUBLIC
     yaze_util
     yaze_common
-    ${ABSL_TARGETS}
   )
   set_target_properties(${name} PROPERTIES
     POSITION_INDEPENDENT_CODE ON
@@ -102,13 +100,15 @@ set(GFX_DEBUG_SRC
 # Layer 1: Foundation types (no dependencies)
 add_library(yaze_gfx_types STATIC ${GFX_TYPES_SRC})
 configure_gfx_library(yaze_gfx_types)
+# Debug: message(STATUS "YAZE_SDL2_TARGETS for gfx_types: '${YAZE_SDL2_TARGETS}'")
+target_link_libraries(yaze_gfx_types PUBLIC ${YAZE_SDL2_TARGETS})
 
 # Layer 2: Backend (depends on types)
 add_library(yaze_gfx_backend STATIC ${GFX_BACKEND_SRC})
 configure_gfx_library(yaze_gfx_backend)
 target_link_libraries(yaze_gfx_backend PUBLIC 
   yaze_gfx_types 
-  ${SDL_TARGETS}
+  ${YAZE_SDL2_TARGETS}
 )
 
 # Layer 3a: Resource management (depends on backend)
@@ -122,6 +122,7 @@ configure_gfx_library(yaze_gfx_render)
 target_link_libraries(yaze_gfx_render PUBLIC 
   yaze_gfx_types
   yaze_gfx_backend
+  ${YAZE_SDL2_TARGETS}
 )
 
 # Layer 3c: Debug tools (depends on types only at this level)
@@ -131,6 +132,7 @@ target_link_libraries(yaze_gfx_debug PUBLIC
   yaze_gfx_types
   yaze_gfx_resource
   ImGui
+  ${YAZE_SDL2_TARGETS}
 )
 
 # Layer 4: Core bitmap (depends on render, debug)

src/app/gui/gui_library.cmake

@@ -134,7 +134,7 @@ target_link_libraries(yaze_gui INTERFACE
   yaze_common
   yaze_net
   ImGui
-  ${SDL_TARGETS}
+  ${YAZE_SDL2_TARGETS}
 )
 
 message(STATUS "✓ yaze_gui library refactored and configured")

src/app/net/net_library.cmake

@@ -31,7 +31,8 @@ target_include_directories(yaze_net PUBLIC
   ${CMAKE_SOURCE_DIR}/src
   ${CMAKE_SOURCE_DIR}/src/lib
   ${CMAKE_SOURCE_DIR}/src/lib/imgui
-  ${SDL2_INCLUDE_DIR}
+  ${CMAKE_SOURCE_DIR}/third_party/json/include
+  ${CMAKE_SOURCE_DIR}/third_party/httplib
   ${PROJECT_BINARY_DIR}
 )
 
@@ -39,13 +40,14 @@ target_link_libraries(yaze_net PUBLIC
   yaze_util
   yaze_common
   ${ABSL_TARGETS}
+  ${YAZE_SDL2_TARGETS}
 )
 
 # Add JSON and httplib support if enabled
 if(YAZE_WITH_JSON)
-  target_include_directories(yaze_net PUBLIC
-    ${CMAKE_SOURCE_DIR}/third_party/json/include
-    ${CMAKE_SOURCE_DIR}/third_party/httplib)
+  # Link nlohmann_json which provides the include directories automatically
+  target_link_libraries(yaze_net PUBLIC nlohmann_json::nlohmann_json)
+  target_include_directories(yaze_net PUBLIC ${CMAKE_SOURCE_DIR}/third_party/httplib)
   target_compile_definitions(yaze_net PUBLIC YAZE_WITH_JSON)
   
   # Add threading support (cross-platform)

src/app/service/grpc_support.cmake

@@ -54,7 +54,7 @@ target_link_libraries(yaze_grpc_support PUBLIC
   yaze_gui
   yaze_emulator
   ${ABSL_TARGETS}
-  ${SDL_TARGETS}
+  ${YAZE_SDL2_TARGETS}
 )
 
 # Add JSON support